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Genome Details

Selected Rep_genome_ID: HRGMv2_2704
Total Genomes Found: 13
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG511_bin.5 1,931,236 92.62% 0.67% NA Africa H3AfricaPhase2
C40.bin_26 2,747,887 93.29% 0.67% China(Inner Mongolia) Asia IMGG
CGMR040178 1,977,405 91.49% 0.92% China Asia CGMR
DianaHT_2018_SRR6795056_bin.21 1,762,874 90.43% 0.671% Bangladesh Asia ELGG
HRGMv2_2704 1,824,029 91.94% 0% Japan Asia HRGM
MGYG000002926 1,891,686 93.96% 0.67% United States North America UHGG
Rep_3216 2,440,567 90.9396% 0.671141% NA NA WIS
SPMP05_bin.151 2,070,054 90.07% 0.67% Singapore Asia SPMP
SPMP06_bin.58 2,158,920 93.18% 1.34% Singapore Asia SPMP
SPMP18_bin.106 2,115,950 91.72% 1.79% Singapore Asia SPMP
SPMP29_bin.40 2,276,158 91.95% 1.68% Singapore Asia SPMP
SPMP37_bin.60 2,109,246 91.28% 1.34% Singapore Asia SPMP
SPMP86_bin.41 1,971,475 90.38% 0.67% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2704_CGC4 CGCFAM_00087 Yes 6 1
HRGMv2_2704_CGC6 CGCFAM_01982 Yes 5 1
HRGMv2_2704_CGC5 CGCFAM_02084 Yes 4 1
HRGMv2_2704_CGC1 CGCFAM_06160 Yes 3 1
Top CAZyme Families