Cluster: HRGMv2_2704_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2704
- CGC Family ID: CGCFAM_01982
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2704_35 | HRGMv2_2704_35_16 | 12885 | 13988 | - | GT28 |
| pfam | HRGMv2_2704_35 | HRGMv2_2704_35_17 | 13985 | 14440 | - | CrtO |
| NULL(UNKNOWN) | HRGMv2_2704_35 | HRGMv2_2704_35_18 | 14681 | 15592 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2704_35 | HRGMv2_2704_35_19 | 15665 | 16315 | - | 3.A.2.2.2 |
| TC | HRGMv2_2704_35 | HRGMv2_2704_35_20 | 16321 | 16764 | - | 3.A.2.2.2 |
Gene ID: HRGMv2_2704_35_16
Type: CAZyme
Location: 12885 - 13988 (-)
Type: CAZyme
Location: 12885 - 13988 (-)
Gene ID: HRGMv2_2704_35_17
Type: pfam
Location: 13985 - 14440 (-)
Type: pfam
Location: 13985 - 14440 (-)
Gene ID: HRGMv2_2704_35_18
Type:
Location: 14681 - 15592 (+)
Type:
Location: 14681 - 15592 (+)
Gene ID: HRGMv2_2704_35_19
Type: TC
Location: 15665 - 16315 (-)
Type: TC
Location: 15665 - 16315 (-)
Gene ID: HRGMv2_2704_35_20
Type: TC
Location: 16321 - 16764 (-)
Type: TC
Location: 16321 - 16764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas coprocola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.