PROTEIN: HRGMv2_2704_35_18
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Protein File & Metadata
Source:
HRGMv2_2704_35_18.pdb
Genome ID:
Protein ID:
HRGMv2_2704_35_18
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Protein Sequence
MKRRILWLLL CTLLCTTMAA CARREAPQLP TAEVQTQPET PEPTQETEPS QAPDQAVSAH 60 GSAAYIHGRT LVVSIFADDA ATHWDETTDA ADIDQTQEHL RIATEWLTDA VKPYGVTAEF 120 FYDWKENPDL RYSAKFTETL VRADGSMYDV QAGYIQENIP TEELKRAYDA DNVVYFFFFN 180 TPYEGTPSPW SLGRLNSQAC DTELVNLFLR AAGPVDEPPS AYAHELLHAF GVPDLYYTGG 240 LIPQAYVDYC KETGSQDIMY TINGDMDRIT GQLTELDAYY LGLTARPAEA DRWQLGLSEY 300 EGE 303
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4AAT1-F1-model_v4 | 31 | 303 | 1 | 559 | 0.3959 |
0.6295 |
| AF-Q9WUQ1-F1-model_v4 | 23 | 303 | 201 | 695 | 0.3849 |
0.6299 |
| AF-E7FCQ4-F1-model_v4 | 14 | 303 | 196 | 686 | 0.3719 |
0.6113 |
| AF-Q9UNA0-F1-model_v4 | 39 | 303 | 1 | 702 | 0.3609 |
0.6137 |
| AF-A0A1W2Q6C2-F1-model_v4 | 10 | 299 | 46 | 650 | 0.359 |
0.5408 |
| AF-D3Z1A5-F1-model_v4 | 21 | 303 | 202 | 686 | 0.3584 |
0.601 |
| AF-Q9UP79-F1-model_v4 | 53 | 303 | 188 | 660 | 0.3566 |
0.6284 |
| AF-P57110-F1-model_v4 | 9 | 303 | 24 | 676 | 0.3538 |
0.5467 |
| AF-P58459-F1-model_v4 | 24 | 303 | 192 | 675 | 0.3512 |
0.5947 |
| AF-A0A0G2KI55-F1-model_v4 | 51 | 303 | 183 | 636 | 0.3502 |
0.6228 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G5BTP5-F1-model_v4 | CBM20 , CBM25 | 19 | 298 | 33 | 468 | 0.39 |
0.6723 |
| AF-A0A221R420-F1-model_v4 | GH23 | 65 | 299 | 66 | 346 | 0.3556 |
0.6758 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A918GDC9 | CBM13 | 65 | 299 | 42 | 306 | 0.4351 |
0.6781 |
| A0A7G5BTP5 | CBM20 , CBM25 | 19 | 298 | 33 | 468 | 0.39 |
0.6723 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9WUQ1-F1-model_v4 | 23 | 303 | 201 | 695 | 0.3849 |
0.6299 |
| AF-Q9UNA0-F1-model_v4 | 39 | 303 | 1 | 702 | 0.3609 |
0.6137 |
| AF-Q9UP79-F1-model_v4 | 53 | 303 | 188 | 660 | 0.3566 |
0.6284 |
| AF-P57110-F1-model_v4 | 9 | 303 | 24 | 676 | 0.3538 |
0.5467 |
| AF-P58459-F1-model_v4 | 24 | 303 | 192 | 675 | 0.3512 |
0.5947 |
| AF-Q9UHI8-F1-model_v4 | 1 | 303 | 16 | 695 | 0.3464 |
0.5313 |
| AF-P97857-F1-model_v4 | 65 | 303 | 256 | 696 | 0.3442 |
0.6483 |
| AF-Q8TE56-F1-model_v4 | 8 | 302 | 27 | 650 | 0.3292 |
0.5315 |
| AF-P59510-F1-model_v4 | 3 | 303 | 194 | 691 | 0.3074 |
0.5415 |