Cluster: HRGMv2_2704_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2704
- CGC Family ID: CGCFAM_02084
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2704_13 | HRGMv2_2704_13_9 | 6986 | 7825 | + | 9.B.157.1.2 |
| NULL(UNKNOWN) | HRGMv2_2704_13 | HRGMv2_2704_13_10 | 7836 | 8342 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2704_13 | HRGMv2_2704_13_11 | 8364 | 10445 | + | X52.001 |
| CAZyme | HRGMv2_2704_13 | HRGMv2_2704_13_12 | 10459 | 12300 | + | GH13_39 |
Gene ID: HRGMv2_2704_13_9
Type: TC
Location: 6986 - 7825 (+)
Type: TC
Location: 6986 - 7825 (+)
Gene ID: HRGMv2_2704_13_10
Type:
Location: 7836 - 8342 (+)
Type:
Location: 7836 - 8342 (+)
Gene ID: HRGMv2_2704_13_11
Type: peptidase
Location: 8364 - 10445 (+)
Type: peptidase
Location: 8364 - 10445 (+)
Gene ID: HRGMv2_2704_13_12
Type: CAZyme
Location: 10459 - 12300 (+)
Type: CAZyme
Location: 10459 - 12300 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas coprocola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.