Genome Details
Selected Rep_genome_ID: HRGMv2_2201
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora timonensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR091669 | 2,135,660 | 94.74% | 0.58% | China | Asia | CGMR |
| HRGMv2_2201 | 2,235,235 | 98.61% | 0% | South Korea | Asia | HRGM |
| MGYG000002202 | 2,368,327 | 97.66% | 0% | Spain | Europe | UHGG |
| Rep_2020 | 2,217,403 | 97.076% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2201_CGC6 | CGCFAM_00097 | Yes | 5 | 1 | |
| HRGMv2_2201_CGC1 | CGCFAM_00199 | Yes | 5 | 2 | |
| HRGMv2_2201_CGC4 | CGCFAM_00242 | Yes | 7 | 1 | |
| HRGMv2_2201_CGC11 | CGCFAM_04916 | Yes | 3 | 1 | |
| HRGMv2_2201_CGC7 | CGCFAM_09249 | Yes | 7 | 1 |
Top CAZyme Families