Cluster: HRGMv2_2201_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2201
- CGC Family ID: CGCFAM_00097
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2201_24 | HRGMv2_2201_24_1 | 51 | 1373 | - | GH32 |
| TC | HRGMv2_2201_24 | HRGMv2_2201_24_2 | 1389 | 2489 | - | 3.A.1.1.27 |
| TC | HRGMv2_2201_24 | HRGMv2_2201_24_3 | 2494 | 3345 | - | 3.A.1.1.20 |
| TC | HRGMv2_2201_24 | HRGMv2_2201_24_4 | 3317 | 4219 | - | 3.A.1.1.20 |
| TC | HRGMv2_2201_24 | HRGMv2_2201_24_5 | 4223 | 5545 | - | 3.A.1.1.5 |
Gene ID: HRGMv2_2201_24_1
Type: CAZyme
Location: 51 - 1373 (-)
Type: CAZyme
Location: 51 - 1373 (-)
Gene ID: HRGMv2_2201_24_2
Type: TC
Location: 1389 - 2489 (-)
Type: TC
Location: 1389 - 2489 (-)
Gene ID: HRGMv2_2201_24_3
Type: TC
Location: 2494 - 3345 (-)
Type: TC
Location: 2494 - 3345 (-)
Gene ID: HRGMv2_2201_24_4
Type: TC
Location: 3317 - 4219 (-)
Type: TC
Location: 3317 - 4219 (-)
Gene ID: HRGMv2_2201_24_5
Type: TC
Location: 4223 - 5545 (-)
Type: TC
Location: 4223 - 5545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.