Cluster: HRGMv2_2201_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2201
- CGC Family ID: CGCFAM_00199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2201_2 | HRGMv2_2201_2_108 | 98471 | 100300 | - | GH13_4 |
| CAZyme | HRGMv2_2201_2 | HRGMv2_2201_2_109 | 100362 | 102539 | - | GH36 |
| TC | HRGMv2_2201_2 | HRGMv2_2201_2_110 | 102572 | 103414 | - | 3.A.1.1.28 |
| TC | HRGMv2_2201_2 | HRGMv2_2201_2_111 | 103414 | 104280 | - | 3.A.1.1.45 |
| TC | HRGMv2_2201_2 | HRGMv2_2201_2_112 | 104299 | 105585 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_2201_2_108
Type: CAZyme
Location: 98471 - 100300 (-)
Type: CAZyme
Location: 98471 - 100300 (-)
Gene ID: HRGMv2_2201_2_109
Type: CAZyme
Location: 100362 - 102539 (-)
Type: CAZyme
Location: 100362 - 102539 (-)
Gene ID: HRGMv2_2201_2_110
Type: TC
Location: 102572 - 103414 (-)
Type: TC
Location: 102572 - 103414 (-)
Gene ID: HRGMv2_2201_2_111
Type: TC
Location: 103414 - 104280 (-)
Type: TC
Location: 103414 - 104280 (-)
Gene ID: HRGMv2_2201_2_112
Type: TC
Location: 104299 - 105585 (-)
Type: TC
Location: 104299 - 105585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.