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Cluster: HRGMv2_2201_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2201_16 HRGMv2_2201_16_23 22949 23620 + 3.A.1.125.3
pfam HRGMv2_2201_16 HRGMv2_2201_16_24 23617 26118 + FtsX | FtsX
STP HRGMv2_2201_16 HRGMv2_2201_16_25 26317 27690 + SBP_bac_1
TC HRGMv2_2201_16 HRGMv2_2201_16_26 27774 28664 + 3.A.1.1.41
TC HRGMv2_2201_16 HRGMv2_2201_16_27 28682 29554 + 3.A.1.1.18
pfam HRGMv2_2201_16 HRGMv2_2201_16_28 29567 29734 + DUF6903
CAZyme HRGMv2_2201_16 HRGMv2_2201_16_29 29766 31928 + GH112
Gene ID: HRGMv2_2201_16_23
Type: TC
Location: 22949 - 23620 (+)
Gene ID: HRGMv2_2201_16_24
Type: pfam
Location: 23617 - 26118 (+)
Gene ID: HRGMv2_2201_16_25
Type: STP
Location: 26317 - 27690 (+)
Gene ID: HRGMv2_2201_16_26
Type: TC
Location: 27774 - 28664 (+)
Gene ID: HRGMv2_2201_16_27
Type: TC
Location: 28682 - 29554 (+)
Gene ID: HRGMv2_2201_16_28
Type: pfam
Location: 29567 - 29734 (+)
Gene ID: HRGMv2_2201_16_29
Type: CAZyme
Location: 29766 - 31928 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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