Genome Details
Selected Rep_genome_ID: HRGMv2_1946
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha sp003150615
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG039_9 | 1,994,660 | 99.26% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_1946 | 1,992,441 | 99.46% | 0% | South Korea | Asia | HRGM |
| MGYG000000418 | 2,050,770 | 99.46% | 0% | Sweden | Europe | UHGG |
| Rep_586 | 2,027,084 | 99.2647% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1946_CGC14 | CGCFAM_00437 | Yes | 7 | 1 | |
| HRGMv2_1946_CGC6 | CGCFAM_01065 | Yes | 5 | 1 | |
| HRGMv2_1946_CGC1 | CGCFAM_01378 | Yes | 7 | 2 | |
| HRGMv2_1946_CGC3 | CGCFAM_02812 | Yes | 3 | 1 | |
| HRGMv2_1946_CGC15 | CGCFAM_02813 | Yes | 4 | 1 | |
| HRGMv2_1946_CGC12 | CGCFAM_02814 | Yes | 8 | 1 | |
| HRGMv2_1946_CGC2 | CGCFAM_02829 | Yes | 3 | 1 | |
| HRGMv2_1946_CGC4 | CGCFAM_02974 | Yes | 5 | 1 | |
| HRGMv2_1946_CGC7 | CGCFAM_04030 | Yes | 11 | 2 | |
| HRGMv2_1946_CGC17 | CGCFAM_08780 | Yes | 4 | 1 |
Top CAZyme Families