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Cluster: HRGMv2_1946_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1946_1 HRGMv2_1946_1_523 591403 592395 + GT2
pfam HRGMv2_1946_1 HRGMv2_1946_1_524 592439 594166 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC HRGMv2_1946_1 HRGMv2_1946_1_525 594347 596212 - 2.A.49.6.3
pfam HRGMv2_1946_1 HRGMv2_1946_1_526 596235 597980 - tRNA-synt_2 | tRNA_anti-codon | GAD
TC HRGMv2_1946_1 HRGMv2_1946_1_527 598117 598776 - 1.A.1.17.2
TC HRGMv2_1946_1 HRGMv2_1946_1_528 598834 599544 + 2.A.124.1.2
peptidase HRGMv2_1946_1 HRGMv2_1946_1_529 599663 600295 + A08.UPW
CAZyme HRGMv2_1946_1 HRGMv2_1946_1_530 600345 601307 + GH73
pfam HRGMv2_1946_1 HRGMv2_1946_1_531 601405 602271 + Lactamase_B
pfam HRGMv2_1946_1 HRGMv2_1946_1_532 602476 603138 + Resolvase
TC HRGMv2_1946_1 HRGMv2_1946_1_533 603601 604512 - 1.A.23.2.1
Gene ID: HRGMv2_1946_1_523
Type: CAZyme
Location: 591403 - 592395 (+)
Gene ID: HRGMv2_1946_1_524
Type: pfam
Location: 592439 - 594166 (+)
Gene ID: HRGMv2_1946_1_525
Type: TC
Location: 594347 - 596212 (-)
Gene ID: HRGMv2_1946_1_526
Type: pfam
Location: 596235 - 597980 (-)
Gene ID: HRGMv2_1946_1_527
Type: TC
Location: 598117 - 598776 (-)
Gene ID: HRGMv2_1946_1_528
Type: TC
Location: 598834 - 599544 (+)
Gene ID: HRGMv2_1946_1_529
Type: peptidase
Location: 599663 - 600295 (+)
Gene ID: HRGMv2_1946_1_530
Type: CAZyme
Location: 600345 - 601307 (+)
Gene ID: HRGMv2_1946_1_531
Type: pfam
Location: 601405 - 602271 (+)
Gene ID: HRGMv2_1946_1_532
Type: pfam
Location: 602476 - 603138 (+)
Gene ID: HRGMv2_1946_1_533
Type: TC
Location: 603601 - 604512 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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