Cluster: HRGMv2_1946_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1946
- CGC Family ID: CGCFAM_01378
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1946_1 | HRGMv2_1946_1_72 | 75227 | 76246 | + | 2.A.7.6.1 |
| pfam | HRGMv2_1946_1 | HRGMv2_1946_1_73 | 76274 | 77095 | + | Aldolase_II |
| CAZyme | HRGMv2_1946_1 | HRGMv2_1946_1_74 | 77201 | 79009 | + | GH78 |
| CAZyme | HRGMv2_1946_1 | HRGMv2_1946_1_75 | 79034 | 81268 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_1946_1 | HRGMv2_1946_1_76 | 81419 | 81685 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_1946_1 | HRGMv2_1946_1_77 | 81946 | 82641 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1946_1 | HRGMv2_1946_1_78 | 82680 | 84161 | - | 3.A.1.18.1 |
Gene ID: HRGMv2_1946_1_72
Type: TC
Location: 75227 - 76246 (+)
Type: TC
Location: 75227 - 76246 (+)
Gene ID: HRGMv2_1946_1_73
Type: pfam
Location: 76274 - 77095 (+)
Type: pfam
Location: 76274 - 77095 (+)
Gene ID: HRGMv2_1946_1_74
Type: CAZyme
Location: 77201 - 79009 (+)
Type: CAZyme
Location: 77201 - 79009 (+)
Gene ID: HRGMv2_1946_1_75
Type: CAZyme
Location: 79034 - 81268 (+)
Type: CAZyme
Location: 79034 - 81268 (+)
Gene ID: HRGMv2_1946_1_76
Type:
Location: 81419 - 81685 (+)
Type:
Location: 81419 - 81685 (+)
Gene ID: HRGMv2_1946_1_77
Type:
Location: 81946 - 82641 (+)
Type:
Location: 81946 - 82641 (+)
Gene ID: HRGMv2_1946_1_78
Type: TC
Location: 82680 - 84161 (-)
Type: TC
Location: 82680 - 84161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha sp003150615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.