Genome Details
Selected Rep_genome_ID: HRGMv2_1750
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CasaburiG_2019_SRR6277104_bin.4 | 1,802,342 | 91.34% | 1.497% | US | North America | ELGG |
| CGMR046188 | 1,855,164 | 99.02% | 0.27% | China | Asia | CGMR |
| CGMR052990 | 1,957,904 | 98.55% | 0.64% | China | Asia | CGMR |
| HRGMv2_1750 | 1,911,047 | 99.65% | 0% | Japan | Asia | HRGM |
| Rep_923 | 1,889,219 | 99.3561% | 0.265152% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1750_CGC4 | CGCFAM_00908 | Yes | 7 | 1 | |
| HRGMv2_1750_CGC12 | CGCFAM_01408 | Yes | 6 | 2 | |
| HRGMv2_1750_CGC10 | CGCFAM_03481 | Yes | 4 | 1 |
Top CAZyme Families