Genome Details
Selected Rep_genome_ID: HRGMv2_1675
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
UBA7748
Species
UBA7748 sp900314535
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1675 | 2,535,851 | 99.19% | 0.806% | Malaysia | Asia | HRGM |
| MGYG000000829 | 2,305,677 | 99.19% | 0.81% | China | Asia | UHGG |
| Rep_2761 | 2,372,872 | 99.1936% | 2.01613% | NA | NA | WIS |
| SPMP93_bin.4 | 2,546,631 | 91.94% | 1.61% | Singapore | Asia | SPMP |
| SW031_59 | 2,574,760 | 99.19% | 0.81% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1675_CGC6 | CGCFAM_00010 | Yes | 7 | 2 | alpha-glucan |
| HRGMv2_1675_CGC18 | CGCFAM_00099 | Yes | 3 | 1 | |
| HRGMv2_1675_CGC31 | CGCFAM_00174 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_1675_CGC29 | CGCFAM_00191 | Yes | 10 | 1 | |
| HRGMv2_1675_CGC19 | CGCFAM_00325 | Yes | 5 | 2 | |
| HRGMv2_1675_CGC13 | CGCFAM_00428 | Yes | 3 | 2 | |
| HRGMv2_1675_CGC11 | CGCFAM_01197 | Yes | 4 | 1 | |
| HRGMv2_1675_CGC26 | CGCFAM_01577 | Yes | 7 | 5 | |
| HRGMv2_1675_CGC10 | CGCFAM_01909 | Yes | 5 | 1 | |
| HRGMv2_1675_CGC12 | CGCFAM_01995 | Yes | 3 | 1 | |
| HRGMv2_1675_CGC17 | CGCFAM_02483 | Yes | 4 | 1 | |
| HRGMv2_1675_CGC27 | CGCFAM_02822 | Yes | 10 | 1 | |
| HRGMv2_1675_CGC1 | CGCFAM_03355 | Yes | 6 | 1 | |
| HRGMv2_1675_CGC21 | CGCFAM_03489 | Yes | 3 | 1 | |
| HRGMv2_1675_CGC16 | CGCFAM_04020 | Yes | 7 | 5 | |
| HRGMv2_1675_CGC30 | CGCFAM_06050 | Yes | 4 | 1 | |
| HRGMv2_1675_CGC34 | CGCFAM_09836 | Yes | 4 | 1 |
Top CAZyme Families