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Cluster: HRGMv2_1675_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1675_27 HRGMv2_1675_27_11 7852 8787 - 3.A.1.5.19
TC HRGMv2_1675_27 HRGMv2_1675_27_12 8784 9842 - 3.A.1.5.25
TC HRGMv2_1675_27 HRGMv2_1675_27_13 9877 10908 - 3.A.1.5.19
TC HRGMv2_1675_27 HRGMv2_1675_27_14 10912 11901 - 3.A.1.5.19
TC HRGMv2_1675_27 HRGMv2_1675_27_15 11976 13646 - 3.A.1.5.19
STP HRGMv2_1675_27 HRGMv2_1675_27_16 13746 14564 - PfkB
STP HRGMv2_1675_27 HRGMv2_1675_27_17 14619 15611 - SIS
TC HRGMv2_1675_27 HRGMv2_1675_27_18 15941 16633 + 4.A.5.1.4
NULL(UNKNOWN) HRGMv2_1675_27 HRGMv2_1675_27_19 16678 16974 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1675_27 HRGMv2_1675_27_20 17050 20025 - GH3
Gene ID: HRGMv2_1675_27_11
Type: TC
Location: 7852 - 8787 (-)
Gene ID: HRGMv2_1675_27_12
Type: TC
Location: 8784 - 9842 (-)
Gene ID: HRGMv2_1675_27_13
Type: TC
Location: 9877 - 10908 (-)
Gene ID: HRGMv2_1675_27_14
Type: TC
Location: 10912 - 11901 (-)
Gene ID: HRGMv2_1675_27_15
Type: TC
Location: 11976 - 13646 (-)
Gene ID: HRGMv2_1675_27_16
Type: STP
Location: 13746 - 14564 (-)
Gene ID: HRGMv2_1675_27_17
Type: STP
Location: 14619 - 15611 (-)
Gene ID: HRGMv2_1675_27_18
Type: TC
Location: 15941 - 16633 (+)
Gene ID: HRGMv2_1675_27_19
Type:
Location: 16678 - 16974 (+)
Gene ID: HRGMv2_1675_27_20
Type: CAZyme
Location: 17050 - 20025 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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