Cluster: HRGMv2_1675_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_1675
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1675_4 | HRGMv2_1675_4_104 | 94218 | 95417 | - | 3.A.1.1.22 |
| CAZyme | HRGMv2_1675_4 | HRGMv2_1675_4_105 | 95419 | 96909 | - | GH77 |
| TC | HRGMv2_1675_4 | HRGMv2_1675_4_106 | 96920 | 97783 | - | 3.A.1.1.45 |
| TC | HRGMv2_1675_4 | HRGMv2_1675_4_107 | 97783 | 98685 | - | 3.A.1.1.45 |
| TC | HRGMv2_1675_4 | HRGMv2_1675_4_108 | 98777 | 100117 | - | 3.A.1.1.45 |
| TF | HRGMv2_1675_4 | HRGMv2_1675_4_109 | 100163 | 101173 | - | LacI |
| CAZyme | HRGMv2_1675_4 | HRGMv2_1675_4_110 | 101423 | 102721 | + | GH13 |
Gene ID: HRGMv2_1675_4_104
Type: TC
Location: 94218 - 95417 (-)
Type: TC
Location: 94218 - 95417 (-)
Gene ID: HRGMv2_1675_4_105
Type: CAZyme
Location: 95419 - 96909 (-)
Type: CAZyme
Location: 95419 - 96909 (-)
Gene ID: HRGMv2_1675_4_106
Type: TC
Location: 96920 - 97783 (-)
Type: TC
Location: 96920 - 97783 (-)
Gene ID: HRGMv2_1675_4_107
Type: TC
Location: 97783 - 98685 (-)
Type: TC
Location: 97783 - 98685 (-)
Gene ID: HRGMv2_1675_4_108
Type: TC
Location: 98777 - 100117 (-)
Type: TC
Location: 98777 - 100117 (-)
Gene ID: HRGMv2_1675_4_109
Type: TF
Location: 100163 - 101173 (-)
Type: TF
Location: 100163 - 101173 (-)
Gene ID: HRGMv2_1675_4_110
Type: CAZyme
Location: 101423 - 102721 (+)
Type: CAZyme
Location: 101423 - 102721 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
UBA7748
Species
UBA7748 sp900314535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.