Genome Details
Selected Rep_genome_ID: HRGMv2_1650
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter avistercoris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG421_maxbin.014 | 2,246,891 | 99.19% | 0.89% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_1650 | 2,163,657 | 99.79% | 0.806% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1650_CGC3 | CGCFAM_00012 | Yes | 3 | 1 | host glycan/beta-glucan |
| HRGMv2_1650_CGC20 | CGCFAM_00067 | Yes | 5 | 1 | galactan |
| HRGMv2_1650_CGC17 | CGCFAM_00160 | Yes | 4 | 2 | alpha-glucan |
| HRGMv2_1650_CGC6 | CGCFAM_00243 | Yes | 9 | 2 | host glycan |
| HRGMv2_1650_CGC9 | CGCFAM_00309 | Yes | 7 | 3 | |
| HRGMv2_1650_CGC1 | CGCFAM_00427 | Yes | 3 | 1 | |
| HRGMv2_1650_CGC2 | CGCFAM_00493 | Yes | 4 | 3 | |
| HRGMv2_1650_CGC15 | CGCFAM_01342 | Yes | 4 | 1 | |
| HRGMv2_1650_CGC14 | CGCFAM_01725 | Yes | 3 | 2 | |
| HRGMv2_1650_CGC18 | CGCFAM_03351 | Yes | 4 | 1 | |
| HRGMv2_1650_CGC11 | CGCFAM_06052 | Yes | 4 | 1 | |
| HRGMv2_1650_CGC16 | CGCFAM_09827 | Yes | 4 | 1 | |
| HRGMv2_1650_CGC4 | CGCFAM_09828 | Yes | 3 | 1 |
Top CAZyme Families