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Cluster: HRGMv2_1650_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1650_7 HRGMv2_1650_7_15 15118 16284 - CE9
STP HRGMv2_1650_7 HRGMv2_1650_7_16 16343 17509 - SIS
TF HRGMv2_1650_7 HRGMv2_1650_7_17 17575 18303 - GntR
TC HRGMv2_1650_7 HRGMv2_1650_7_18 18352 18786 - 4.A.6.1.1
NULL(UNKNOWN) HRGMv2_1650_7 HRGMv2_1650_7_19 18887 19507 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1650_7 HRGMv2_1650_7_20 19672 20493 - 4.A.6.1.18
TC HRGMv2_1650_7 HRGMv2_1650_7_21 20483 21391 - 4.A.6.1.18
TC HRGMv2_1650_7 HRGMv2_1650_7_22 21481 21945 - 4.A.6.1.18
CAZyme HRGMv2_1650_7 HRGMv2_1650_7_23 21947 23752 - GH35
Gene ID: HRGMv2_1650_7_15
Type: CAZyme
Location: 15118 - 16284 (-)
Gene ID: HRGMv2_1650_7_16
Type: STP
Location: 16343 - 17509 (-)
Gene ID: HRGMv2_1650_7_17
Type: TF
Location: 17575 - 18303 (-)
Gene ID: HRGMv2_1650_7_18
Type: TC
Location: 18352 - 18786 (-)
Gene ID: HRGMv2_1650_7_19
Type:
Location: 18887 - 19507 (-)
Gene ID: HRGMv2_1650_7_20
Type: TC
Location: 19672 - 20493 (-)
Gene ID: HRGMv2_1650_7_21
Type: TC
Location: 20483 - 21391 (-)
Gene ID: HRGMv2_1650_7_22
Type: TC
Location: 21481 - 21945 (-)
Gene ID: HRGMv2_1650_7_23
Type: CAZyme
Location: 21947 - 23752 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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