Genome Details
Selected Rep_genome_ID: HRGMv2_1557
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900543275
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1557 | 2,201,010 | 100% | 0.806% | Malaysia | Asia | HRGM |
| HRGMv2_1566 | 2,162,125 | 96.77% | 0.806% | Malaysia | Asia | HRGM |
| SPMP08_bin.61 | 2,086,585 | 97.85% | 0.81% | Singapore | Asia | SPMP |
| SPMP59_bin.7 | 2,236,465 | 98.92% | 0.81% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1557_CGC5 | CGCFAM_00003 | Yes | 7 | 3 | |
| HRGMv2_1557_CGC6 | CGCFAM_00011 | Yes | 7 | 4 | |
| HRGMv2_1557_CGC11 | CGCFAM_00413 | Yes | 7 | 2 |
Top CAZyme Families