dbCAN HGM

Cluster: HRGMv2_1557_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1557_3	HRGMv2_1557_3_11	12663	13475	+	3.A.1.103.4
TC	HRGMv2_1557_3	HRGMv2_1557_3_12	13485	14240	+	3.A.1.103.1
CAZyme	HRGMv2_1557_3	HRGMv2_1557_3_13	14242	15351	+	GT2
CAZyme	HRGMv2_1557_3	HRGMv2_1557_3_14	15360	16418	+	GT2
CAZyme	HRGMv2_1557_3	HRGMv2_1557_3_15	16440	17675	+	GT4
CAZyme	HRGMv2_1557_3	HRGMv2_1557_3_16	17701	19245	-	GT81
TC	HRGMv2_1557_3	HRGMv2_1557_3_17	19368	20210	+	3.A.1.103.1

Gene ID: HRGMv2_1557_3_11
Type: TC
Location: 12663 - 13475 (+)

Gene ID: HRGMv2_1557_3_12
Type: TC
Location: 13485 - 14240 (+)

Gene ID: HRGMv2_1557_3_13
Type: CAZyme
Location: 14242 - 15351 (+)

Gene ID: HRGMv2_1557_3_14
Type: CAZyme
Location: 15360 - 16418 (+)

Gene ID: HRGMv2_1557_3_15
Type: CAZyme
Location: 16440 - 17675 (+)

Gene ID: HRGMv2_1557_3_16
Type: CAZyme
Location: 17701 - 19245 (-)

Gene ID: HRGMv2_1557_3_17
Type: TC
Location: 19368 - 20210 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1557_3_11	vegetarian > vegan	1.26916	0.03702
HRGMv2_1557_3_12	vegetarian > vegan	1.14076	0.01637
HRGMv2_1557_3_13	vegetarian > vegan	2.77890	0.03702
HRGMv2_1557_3_14	vegetarian > vegan	3.95454	0.01637
HRGMv2_1557_3_15	vegetarian > vegan	3.67626	0.01637