Genome Details
Selected Rep_genome_ID: HRGMv2_1515
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1515 | 2,298,167 | 100% | 0.806% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1515_CGC13 | CGCFAM_00012 | Yes | 8 | 2 | host glycan/beta-glucan |
| HRGMv2_1515_CGC19 | CGCFAM_00019 | Yes | 13 | 1 | |
| HRGMv2_1515_CGC1 | CGCFAM_00024 | Yes | 16 | 1 | |
| HRGMv2_1515_CGC9 | CGCFAM_01608 | Yes | 15 | 9 |
Top CAZyme Families