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Cluster: HRGMv2_1515_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1515_11 HRGMv2_1515_11_41 46439 48781 - 3.A.3.5.15
STP HRGMv2_1515_11 HRGMv2_1515_11_42 49191 51275 - Pkinase
STP HRGMv2_1515_11 HRGMv2_1515_11_43 51447 52409 - FHA
TC HRGMv2_1515_11 HRGMv2_1515_11_44 52989 55247 + 1.I.1.1.3
STP HRGMv2_1515_11 HRGMv2_1515_11_45 55869 56630 + Fer4
TC HRGMv2_1515_11 HRGMv2_1515_11_46 56911 57423 + 4.A.1.2.5
pfam HRGMv2_1515_11 HRGMv2_1515_11_47 57430 58296 + PRD | PRD | CAT_RBD
TC HRGMv2_1515_11 HRGMv2_1515_11_48 58396 60012 + 4.A.1.1.3
CAZyme HRGMv2_1515_11 HRGMv2_1515_11_49 60016 61398 + GH4
STP HRGMv2_1515_11 HRGMv2_1515_11_50 61655 63487 + Pyr_redox_2
TC HRGMv2_1515_11 HRGMv2_1515_11_51 63481 65292 + 3.D.1.5.1
pfam HRGMv2_1515_11 HRGMv2_1515_11_52 65295 66353 + NMT1
TC HRGMv2_1515_11 HRGMv2_1515_11_53 66357 67733 + 3.A.1.125.5
Gene ID: HRGMv2_1515_11_41
Type: TC
Location: 46439 - 48781 (-)
Gene ID: HRGMv2_1515_11_42
Type: STP
Location: 49191 - 51275 (-)
Gene ID: HRGMv2_1515_11_43
Type: STP
Location: 51447 - 52409 (-)
Gene ID: HRGMv2_1515_11_44
Type: TC
Location: 52989 - 55247 (+)
Gene ID: HRGMv2_1515_11_45
Type: STP
Location: 55869 - 56630 (+)
Gene ID: HRGMv2_1515_11_46
Type: TC
Location: 56911 - 57423 (+)
Gene ID: HRGMv2_1515_11_47
Type: pfam
Location: 57430 - 58296 (+)
Gene ID: HRGMv2_1515_11_48
Type: TC
Location: 58396 - 60012 (+)
Gene ID: HRGMv2_1515_11_49
Type: CAZyme
Location: 60016 - 61398 (+)
Gene ID: HRGMv2_1515_11_50
Type: STP
Location: 61655 - 63487 (+)
Gene ID: HRGMv2_1515_11_51
Type: TC
Location: 63481 - 65292 (+)
Gene ID: HRGMv2_1515_11_52
Type: pfam
Location: 65295 - 66353 (+)
Gene ID: HRGMv2_1515_11_53
Type: TC
Location: 66357 - 67733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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