Genome Details
Selected Rep_genome_ID: HRGMv2_1504
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1504 | 2,291,962 | 95.16% | 0.806% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1504_CGC18 | CGCFAM_00002 | Yes | 6 | 2 | |
| HRGMv2_1504_CGC19 | CGCFAM_00006 | Yes | 12 | 5 | |
| HRGMv2_1504_CGC3 | CGCFAM_00014 | Yes | 12 | 2 | host glycan |
| HRGMv2_1504_CGC7 | CGCFAM_00464 | Yes | 6 | 4 | |
| HRGMv2_1504_CGC6 | CGCFAM_01160 | Yes | 14 | 5 |
Top CAZyme Families