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Cluster: HRGMv2_1504_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1504_3 HRGMv2_1504_3_69 68253 69722 + 3.A.11.1.3
pfam HRGMv2_1504_3 HRGMv2_1504_3_70 69734 69949 + DUF3006
TC HRGMv2_1504_3 HRGMv2_1504_3_71 70547 71029 + 4.A.6.1.5
sulfatase HRGMv2_1504_3 HRGMv2_1504_3_72 71356 72408 - S1_4
TF HRGMv2_1504_3 HRGMv2_1504_3_73 72614 73378 + HTH_DeoR
CAZyme HRGMv2_1504_3 HRGMv2_1504_3_74 74056 75477 - GH1
TC HRGMv2_1504_3 HRGMv2_1504_3_75 75553 77331 - 4.A.3.1.1
TF HRGMv2_1504_3 HRGMv2_1504_3_76 77616 78617 + LacI
CAZyme HRGMv2_1504_3 HRGMv2_1504_3_77 78889 80328 - GH1
TC HRGMv2_1504_3 HRGMv2_1504_3_78 80399 82174 - 4.A.3.1.1
TF HRGMv2_1504_3 HRGMv2_1504_3_79 82532 83536 + LacI
TC HRGMv2_1504_3 HRGMv2_1504_3_80 83751 84089 + 4.A.3.1.2
Gene ID: HRGMv2_1504_3_69
Type: TC
Location: 68253 - 69722 (+)
Gene ID: HRGMv2_1504_3_70
Type: pfam
Location: 69734 - 69949 (+)
Gene ID: HRGMv2_1504_3_71
Type: TC
Location: 70547 - 71029 (+)
Gene ID: HRGMv2_1504_3_72
Type: sulfatase
Location: 71356 - 72408 (-)
Gene ID: HRGMv2_1504_3_73
Type: TF
Location: 72614 - 73378 (+)
Gene ID: HRGMv2_1504_3_74
Type: CAZyme
Location: 74056 - 75477 (-)
Gene ID: HRGMv2_1504_3_75
Type: TC
Location: 75553 - 77331 (-)
Gene ID: HRGMv2_1504_3_76
Type: TF
Location: 77616 - 78617 (+)
Gene ID: HRGMv2_1504_3_77
Type: CAZyme
Location: 78889 - 80328 (-)
Gene ID: HRGMv2_1504_3_78
Type: TC
Location: 80399 - 82174 (-)
Gene ID: HRGMv2_1504_3_79
Type: TF
Location: 82532 - 83536 (+)
Gene ID: HRGMv2_1504_3_80
Type: TC
Location: 83751 - 84089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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