Genome Details
Selected Rep_genome_ID: HRGMv2_0904
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0904 | 2,129,907 | 100% | 0.806% | UK | Europe | HRGM |
| HRGMv2_0960 | 2,039,735 | 99.59% | 1.344% | United Kingdom | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0904_CGC14 | CGCFAM_00002 | Yes | 7 | 4 | |
| HRGMv2_0904_CGC12 | CGCFAM_00008 | Yes | 9 | 4 | |
| HRGMv2_0904_CGC7 | CGCFAM_00019 | Yes | 12 | 1 | |
| HRGMv2_0904_CGC15 | CGCFAM_00024 | Yes | 11 | 1 | |
| HRGMv2_0904_CGC8 | CGCFAM_03691 | Yes | 5 | 1 |
Top CAZyme Families