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Cluster: HRGMv2_0904_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0904_13 HRGMv2_0904_13_11 13914 16256 - 3.A.3.5.15
STP HRGMv2_0904_13 HRGMv2_0904_13_12 16673 18757 - Pkinase
STP HRGMv2_0904_13 HRGMv2_0904_13_13 18929 19891 - FHA
TC HRGMv2_0904_13 HRGMv2_0904_13_14 20399 22648 + 1.I.1.1.3
STP HRGMv2_0904_13 HRGMv2_0904_13_15 23266 24027 + Fer4
TC HRGMv2_0904_13 HRGMv2_0904_13_16 24450 24962 + 4.A.1.2.5
pfam HRGMv2_0904_13 HRGMv2_0904_13_17 24969 25835 + PRD | PRD | CAT_RBD
TC HRGMv2_0904_13 HRGMv2_0904_13_18 25935 27551 + 4.A.1.1.3
CAZyme HRGMv2_0904_13 HRGMv2_0904_13_19 27555 28937 + GH4
STP HRGMv2_0904_13 HRGMv2_0904_13_20 29194 31881 + Fer4 | Pyr_redox_2
NULL(UNKNOWN) HRGMv2_0904_13 HRGMv2_0904_13_21 31884 32942 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0904_13 HRGMv2_0904_13_22 33215 34321 + 3.A.1.17.10
Gene ID: HRGMv2_0904_13_11
Type: TC
Location: 13914 - 16256 (-)
Gene ID: HRGMv2_0904_13_12
Type: STP
Location: 16673 - 18757 (-)
Gene ID: HRGMv2_0904_13_13
Type: STP
Location: 18929 - 19891 (-)
Gene ID: HRGMv2_0904_13_14
Type: TC
Location: 20399 - 22648 (+)
Gene ID: HRGMv2_0904_13_15
Type: STP
Location: 23266 - 24027 (+)
Gene ID: HRGMv2_0904_13_16
Type: TC
Location: 24450 - 24962 (+)
Gene ID: HRGMv2_0904_13_17
Type: pfam
Location: 24969 - 25835 (+)
Gene ID: HRGMv2_0904_13_18
Type: TC
Location: 25935 - 27551 (+)
Gene ID: HRGMv2_0904_13_19
Type: CAZyme
Location: 27555 - 28937 (+)
Gene ID: HRGMv2_0904_13_20
Type: STP
Location: 29194 - 31881 (+)
Gene ID: HRGMv2_0904_13_21
Type:
Location: 31884 - 32942 (+)
Gene ID: HRGMv2_0904_13_22
Type: TC
Location: 33215 - 34321 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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