Genome Details
Selected Rep_genome_ID: HRGMv2_0869
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019414605
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0869 | 2,286,864 | 100% | 0.806% | Japan | Asia | HRGM |
| MGYG000000772 | 2,044,239 | 99.19% | 0.81% | Japan | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0869_CGC2 | CGCFAM_00002 | Yes | 6 | 3 | |
| HRGMv2_0869_CGC16 | CGCFAM_00007 | Yes | 8 | 3 | |
| HRGMv2_0869_CGC15 | CGCFAM_00008 | Yes | 7 | 2 | |
| HRGMv2_0869_CGC14 | CGCFAM_00018 | Yes | 10 | 5 | |
| HRGMv2_0869_CGC8 | CGCFAM_00019 | Yes | 9 | 1 |
Top CAZyme Families