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Cluster: HRGMv2_0869_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0869_17 HRGMv2_0869_17_14 13513 14196 - 3.A.1.17.10
CAZyme HRGMv2_0869_17 HRGMv2_0869_17_15 14805 16187 - GH4
TC HRGMv2_0869_17 HRGMv2_0869_17_16 16191 17807 - 4.A.1.1.3
pfam HRGMv2_0869_17 HRGMv2_0869_17_17 17907 18203 - PRD
pfam HRGMv2_0869_17 HRGMv2_0869_17_18 18222 18773 - PRD | CAT_RBD
TC HRGMv2_0869_17 HRGMv2_0869_17_19 18780 19292 - 4.A.1.2.5
STP HRGMv2_0869_17 HRGMv2_0869_17_20 19573 20334 - Fer4
TC HRGMv2_0869_17 HRGMv2_0869_17_21 20954 23197 - 1.I.1.1.3
TC HRGMv2_0869_17 HRGMv2_0869_17_22 23758 26097 + 3.A.3.5.15
Gene ID: HRGMv2_0869_17_14
Type: TC
Location: 13513 - 14196 (-)
Gene ID: HRGMv2_0869_17_15
Type: CAZyme
Location: 14805 - 16187 (-)
Gene ID: HRGMv2_0869_17_16
Type: TC
Location: 16191 - 17807 (-)
Gene ID: HRGMv2_0869_17_17
Type: pfam
Location: 17907 - 18203 (-)
Gene ID: HRGMv2_0869_17_18
Type: pfam
Location: 18222 - 18773 (-)
Gene ID: HRGMv2_0869_17_19
Type: TC
Location: 18780 - 19292 (-)
Gene ID: HRGMv2_0869_17_20
Type: STP
Location: 19573 - 20334 (-)
Gene ID: HRGMv2_0869_17_21
Type: TC
Location: 20954 - 23197 (-)
Gene ID: HRGMv2_0869_17_22
Type: TC
Location: 23758 - 26097 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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