Genome Details
Selected Rep_genome_ID: HRGMv2_0551
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0551 | 2,866,375 | 97.25% | 0.185% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0551_CGC1 | CGCFAM_00025 | Yes | 8 | 3 | pectin/alpha-glucan |
| HRGMv2_0551_CGC11 | CGCFAM_00069 | Yes | 6 | 2 | |
| HRGMv2_0551_CGC10 | CGCFAM_00135 | Yes | 4 | 1 | |
| HRGMv2_0551_CGC8 | CGCFAM_00300 | Yes | 4 | 2 | |
| HRGMv2_0551_CGC4 | CGCFAM_00730 | Yes | 3 | 2 | |
| HRGMv2_0551_CGC15 | CGCFAM_02001 | Yes | 3 | 1 | |
| HRGMv2_0551_CGC29 | CGCFAM_09509 | Yes | 4 | 1 | |
| HRGMv2_0551_CGC16 | CGCFAM_09714 | Yes | 9 | 1 | |
| HRGMv2_0551_CGC2 | CGCFAM_09715 | Yes | 10 | 2 | |
| HRGMv2_0551_CGC7 | CGCFAM_09716 | Yes | 3 | 1 |
Top CAZyme Families