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Cluster: HRGMv2_0551_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0551_46 HRGMv2_0551_46_6 4541 5821 + 1.B.6.1.2
NULL(UNKNOWN) HRGMv2_0551_46 HRGMv2_0551_46_7 5841 6998 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0551_46 HRGMv2_0551_46_8 7148 7936 - Hexapep | Hexapep | Acetyltransf_11
TC HRGMv2_0551_46 HRGMv2_0551_46_9 7970 9460 - 2.A.6.2.42
TC HRGMv2_0551_46 HRGMv2_0551_46_10 9464 12883 - 2.A.6.2.22
TC HRGMv2_0551_46 HRGMv2_0551_46_11 13002 14168 - 8.A.1.6.3
NULL(UNKNOWN) HRGMv2_0551_46 HRGMv2_0551_46_12 14894 15862 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0551_46 HRGMv2_0551_46_13 15939 17987 + GH20
TC HRGMv2_0551_46 HRGMv2_0551_46_14 18401 20557 + 8.A.3.3.3
Gene ID: HRGMv2_0551_46_6
Type: TC
Location: 4541 - 5821 (+)
Gene ID: HRGMv2_0551_46_7
Type:
Location: 5841 - 6998 (+)
Gene ID: HRGMv2_0551_46_8
Type: pfam
Location: 7148 - 7936 (-)
Gene ID: HRGMv2_0551_46_9
Type: TC
Location: 7970 - 9460 (-)
Gene ID: HRGMv2_0551_46_10
Type: TC
Location: 9464 - 12883 (-)
Gene ID: HRGMv2_0551_46_11
Type: TC
Location: 13002 - 14168 (-)
Gene ID: HRGMv2_0551_46_12
Type:
Location: 14894 - 15862 (+)
Gene ID: HRGMv2_0551_46_13
Type: CAZyme
Location: 15939 - 17987 (+)
Gene ID: HRGMv2_0551_46_14
Type: TC
Location: 18401 - 20557 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Alloprevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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