Genome Details
Selected Rep_genome_ID: HRGMv2_0538
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes montrealensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR059057 | 3,364,346 | 96.88% | 0% | China | Asia | CGMR |
| HRGMv2_0538 | 3,244,803 | 98.15% | 0% | China | Asia | HRGM |
| Rep_612 | 3,325,933 | 96.4744% | 0.480769% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0538_CGC11 | CGCFAM_02860 | Yes | 12 | 1 | |
| HRGMv2_0538_CGC14 | CGCFAM_02965 | Yes | 12 | 4 | |
| HRGMv2_0538_CGC27 | CGCFAM_03386 | Yes | 5 | 2 | |
| HRGMv2_0538_CGC7 | CGCFAM_03588 | Yes | 3 | 1 | |
| HRGMv2_0538_CGC20 | CGCFAM_05937 | Yes | 7 | 5 | |
| HRGMv2_0538_CGC1 | CGCFAM_08782 | Yes | 5 | 1 |
Top CAZyme Families