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Cluster: HRGMv2_0538_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0538_40 HRGMv2_0538_40_1 3 1490 + GH182
CAZyme HRGMv2_0538_40 HRGMv2_0538_40_2 1504 4230 + GH2
sulfatase HRGMv2_0538_40 HRGMv2_0538_40_3 4227 6089 + S1_24
CAZyme HRGMv2_0538_40 HRGMv2_0538_40_4 6115 7518 + GH43_26
CAZyme HRGMv2_0538_40 HRGMv2_0538_40_5 7567 8763 + GH105
CAZyme HRGMv2_0538_40 HRGMv2_0538_40_6 8776 10080 + GH105
TC HRGMv2_0538_40 HRGMv2_0538_40_7 10241 13417 + 1.B.14.6.1
Gene ID: HRGMv2_0538_40_1
Type: CAZyme
Location: 3 - 1490 (+)
Gene ID: HRGMv2_0538_40_2
Type: CAZyme
Location: 1504 - 4230 (+)
Gene ID: HRGMv2_0538_40_3
Type: sulfatase
Location: 4227 - 6089 (+)
Gene ID: HRGMv2_0538_40_4
Type: CAZyme
Location: 6115 - 7518 (+)
Gene ID: HRGMv2_0538_40_5
Type: CAZyme
Location: 7567 - 8763 (+)
Gene ID: HRGMv2_0538_40_6
Type: CAZyme
Location: 8776 - 10080 (+)
Gene ID: HRGMv2_0538_40_7
Type: TC
Location: 10241 - 13417 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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