Genome Details
Selected Rep_genome_ID: HRGMv2_0536
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp947290775
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR035941 | 1,760,072 | 96.15% | 0.63% | China | Asia | CGMR |
| HRGMv2_0536 | 1,830,906 | 96.14% | 0.314% | China | Asia | HRGM |
| MGYG000003754 | 1,700,916 | 93.08% | 0.31% | Canada | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0536_CGC5 | CGCFAM_00003 | Yes | 12 | 5 | |
| HRGMv2_0536_CGC4 | CGCFAM_00013 | Yes | 7 | 2 | |
| HRGMv2_0536_CGC1 | CGCFAM_00028 | Yes | 5 | 3 | |
| HRGMv2_0536_CGC2 | CGCFAM_00837 | Yes | 4 | 1 | |
| HRGMv2_0536_CGC3 | CGCFAM_01678 | Yes | 4 | 1 |
Top CAZyme Families