Cluster: HRGMv2_0536_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0536
- CGC Family ID: CGCFAM_00028
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0536_1 | HRGMv2_0536_1_61 | 56872 | 58737 | - | 2.A.9.3.2 |
| peptidase | HRGMv2_0536_1 | HRGMv2_0536_1_62 | 58812 | 60437 | - | C26.964 |
| CAZyme | HRGMv2_0536_1 | HRGMv2_0536_1_63 | 61337 | 63316 | + | GH133 |
| CAZyme | HRGMv2_0536_1 | HRGMv2_0536_1_64 | 63335 | 64591 | + | GT4 |
| CAZyme | HRGMv2_0536_1 | HRGMv2_0536_1_65 | 64588 | 65868 | + | GH57 |
Gene ID: HRGMv2_0536_1_61
Type: TC
Location: 56872 - 58737 (-)
Type: TC
Location: 56872 - 58737 (-)
Gene ID: HRGMv2_0536_1_62
Type: peptidase
Location: 58812 - 60437 (-)
Type: peptidase
Location: 58812 - 60437 (-)
Gene ID: HRGMv2_0536_1_63
Type: CAZyme
Location: 61337 - 63316 (+)
Type: CAZyme
Location: 61337 - 63316 (+)
Gene ID: HRGMv2_0536_1_64
Type: CAZyme
Location: 63335 - 64591 (+)
Type: CAZyme
Location: 63335 - 64591 (+)
Gene ID: HRGMv2_0536_1_65
Type: CAZyme
Location: 64588 - 65868 (+)
Type: CAZyme
Location: 64588 - 65868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp947290775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.