Genome Details
Selected Rep_genome_ID: HRGMv2_0289
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-485
Species
CAG-485 sp000437495
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| FerrettiP_2018_SRR5274022_bin.32 | 2,260,393 | 92.54% | 0.566% | Italy | Europe | ELGG |
| HRGMv2_0289 | 2,362,071 | 98.9% | 0% | Japan | Asia | HRGM |
| MGYG000003158 | 2,372,676 | 98.18% | 0% | United States | North America | UHGG |
| Rep_284 | 2,391,179 | 96.2893% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0289_CGC13 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0289_CGC4 | CGCFAM_00028 | Yes | 4 | 3 | |
| HRGMv2_0289_CGC7 | CGCFAM_00556 | Yes | 3 | 1 | |
| HRGMv2_0289_CGC5 | CGCFAM_00617 | Yes | 9 | 1 | |
| HRGMv2_0289_CGC9 | CGCFAM_00878 | Yes | 7 | 1 | |
| HRGMv2_0289_CGC18 | CGCFAM_01780 | Yes | 4 | 1 | |
| HRGMv2_0289_CGC22 | CGCFAM_04500 | Yes | 10 | 2 | |
| HRGMv2_0289_CGC6 | CGCFAM_06898 | Yes | 4 | 1 | |
| HRGMv2_0289_CGC15 | CGCFAM_09572 | Yes | 4 | 1 | |
| HRGMv2_0289_CGC23 | CGCFAM_09573 | Yes | 3 | 1 |
Top CAZyme Families