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Cluster: HRGMv2_0289_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0289_59 HRGMv2_0289_59_1 183 1469 + GH175
pfam HRGMv2_0289_59 HRGMv2_0289_59_2 1545 2060 - Flavodoxin_4
pfam HRGMv2_0289_59 HRGMv2_0289_59_3 2201 2494 - Dabb
TC HRGMv2_0289_59 HRGMv2_0289_59_4 2497 4122 - 3.A.1.121.4
pfam HRGMv2_0289_59 HRGMv2_0289_59_5 4122 5225 - PGA_cap
pfam HRGMv2_0289_59 HRGMv2_0289_59_6 5328 6206 - THF_DHG_CYH | THF_DHG_CYH_C
TC HRGMv2_0289_59 HRGMv2_0289_59_7 6228 7574 - 3.A.5.1.1
pfam HRGMv2_0289_59 HRGMv2_0289_59_8 7600 7956 - Asp_decarbox
pfam HRGMv2_0289_59 HRGMv2_0289_59_9 7960 8826 - Pantoate_ligase
CAZyme HRGMv2_0289_59 HRGMv2_0289_59_10 9027 9851 + GT5
Gene ID: HRGMv2_0289_59_1
Type: CAZyme
Location: 183 - 1469 (+)
Gene ID: HRGMv2_0289_59_2
Type: pfam
Location: 1545 - 2060 (-)
Gene ID: HRGMv2_0289_59_3
Type: pfam
Location: 2201 - 2494 (-)
Gene ID: HRGMv2_0289_59_4
Type: TC
Location: 2497 - 4122 (-)
Gene ID: HRGMv2_0289_59_5
Type: pfam
Location: 4122 - 5225 (-)
Gene ID: HRGMv2_0289_59_6
Type: pfam
Location: 5328 - 6206 (-)
Gene ID: HRGMv2_0289_59_7
Type: TC
Location: 6228 - 7574 (-)
Gene ID: HRGMv2_0289_59_8
Type: pfam
Location: 7600 - 7956 (-)
Gene ID: HRGMv2_0289_59_9
Type: pfam
Location: 7960 - 8826 (-)
Gene ID: HRGMv2_0289_59_10
Type: CAZyme
Location: 9027 - 9851 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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