Cluster: HRGMv2_0289_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0289
- CGC Family ID: CGCFAM_00878
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0289_7 | HRGMv2_0289_7_31 | 37505 | 38731 | - | 9.A.40.1.2 |
| CAZyme | HRGMv2_0289_7 | HRGMv2_0289_7_32 | 39065 | 40396 | - | GT30 |
| pfam | HRGMv2_0289_7 | HRGMv2_0289_7_33 | 40393 | 41910 | - | tRNA-synt_1c | Anticodon_2 |
| pfam | HRGMv2_0289_7 | HRGMv2_0289_7_34 | 41968 | 42768 | - | DUF3256 |
| TC | HRGMv2_0289_7 | HRGMv2_0289_7_35 | 42765 | 44612 | - | 3.A.18.1.1 |
| NULL(UNKNOWN) | HRGMv2_0289_7 | HRGMv2_0289_7_36 | 45046 | 45165 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0289_7 | HRGMv2_0289_7_37 | 45120 | 46304 | + | 9.B.146.1.4 |
Gene ID: HRGMv2_0289_7_31
Type: TC
Location: 37505 - 38731 (-)
Type: TC
Location: 37505 - 38731 (-)
Gene ID: HRGMv2_0289_7_32
Type: CAZyme
Location: 39065 - 40396 (-)
Type: CAZyme
Location: 39065 - 40396 (-)
Gene ID: HRGMv2_0289_7_33
Type: pfam
Location: 40393 - 41910 (-)
Type: pfam
Location: 40393 - 41910 (-)
Gene ID: HRGMv2_0289_7_34
Type: pfam
Location: 41968 - 42768 (-)
Type: pfam
Location: 41968 - 42768 (-)
Gene ID: HRGMv2_0289_7_35
Type: TC
Location: 42765 - 44612 (-)
Type: TC
Location: 42765 - 44612 (-)
Gene ID: HRGMv2_0289_7_36
Type:
Location: 45046 - 45165 (+)
Type:
Location: 45046 - 45165 (+)
Gene ID: HRGMv2_0289_7_37
Type: TC
Location: 45120 - 46304 (+)
Type: TC
Location: 45120 - 46304 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp000437495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.