Genome Details
Selected Rep_genome_ID: GH211_15
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus agilis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH211_15 | 2,113,480 | 98.69% | 1.05% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH211_15_CGC9 | CGCFAM_00004 | Yes | 14 | 6 | alpha-glucan |
| GH211_15_CGC1 | CGCFAM_00205 | Yes | 4 | 1 | |
| GH211_15_CGC5 | CGCFAM_00328 | Yes | 8 | 3 | |
| GH211_15_CGC18 | CGCFAM_00348 | Yes | 10 | 6 | |
| GH211_15_CGC4 | CGCFAM_00453 | Yes | 7 | 2 | |
| GH211_15_CGC7 | CGCFAM_01559 | Yes | 10 | 2 | |
| GH211_15_CGC19 | CGCFAM_03681 | Yes | 3 | 1 | |
| GH211_15_CGC8 | CGCFAM_04239 | Yes | 3 | 2 |
Top CAZyme Families