Cluster: GH211_15_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: GH211_15
- CGC Family ID: CGCFAM_00453
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_371216 | k141_371216_4 | 3392 | 4333 | + | 4.A.6.1.10 |
| TC | k141_371216 | k141_371216_5 | 4352 | 5170 | + | 4.A.6.1.19 |
| TC | k141_371216 | k141_371216_6 | 5187 | 6014 | + | 4.A.6.1.19 |
| CAZyme | k141_371216 | k141_371216_7 | 6033 | 7691 | + | GH13_31 |
| TF | k141_371216 | k141_371216_8 | 7816 | 8277 | - | MarR |
| TC | k141_371216 | k141_371216_9 | 8435 | 10303 | + | 4.A.1.2.11 |
| CAZyme | k141_371216 | k141_371216_10 | 10317 | 11723 | + | GH1 |
Gene ID: k141_371216_4
Type: TC
Location: 3392 - 4333 (+)
Type: TC
Location: 3392 - 4333 (+)
Gene ID: k141_371216_5
Type: TC
Location: 4352 - 5170 (+)
Type: TC
Location: 4352 - 5170 (+)
Gene ID: k141_371216_6
Type: TC
Location: 5187 - 6014 (+)
Type: TC
Location: 5187 - 6014 (+)
Gene ID: k141_371216_7
Type: CAZyme
Location: 6033 - 7691 (+)
Type: CAZyme
Location: 6033 - 7691 (+)
Gene ID: k141_371216_8
Type: TF
Location: 7816 - 8277 (-)
Type: TF
Location: 7816 - 8277 (-)
Gene ID: k141_371216_9
Type: TC
Location: 8435 - 10303 (+)
Type: TC
Location: 8435 - 10303 (+)
Gene ID: k141_371216_10
Type: CAZyme
Location: 10317 - 11723 (+)
Type: CAZyme
Location: 10317 - 11723 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus agilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.