Cluster: GH211_15_CGC9
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate: alpha-glucan
- Genome ID: GH211_15
- CGC Family ID: CGCFAM_00004
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_448228 | k141_448228_4 | 4160 | 5176 | - | GT4 |
| CAZyme | k141_448228 | k141_448228_5 | 5203 | 6387 | - | GT4 |
| TC | k141_448228 | k141_448228_6 | 6573 | 8291 | - | 8.A.7.1.1 |
| STP | k141_448228 | k141_448228_7 | 8291 | 8560 | - | PTS-HPr |
| NULL(UNKNOWN) | k141_448228 | k141_448228_8 | 8758 | 8946 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_448228 | k141_448228_9 | 9145 | 11334 | + | 3.A.9.1.2 |
| pfam | k141_448228 | k141_448228_10 | 11493 | 11777 | + | DUF1827 |
| pfam | k141_448228 | k141_448228_11 | 11958 | 13004 | + | MucBP | MucBP |
| CAZyme | k141_448228 | k141_448228_12 | 13031 | 14869 | - | GH13_39 |
| CAZyme | k141_448228 | k141_448228_13 | 14850 | 17288 | - | GT35 |
| CAZyme | k141_448228 | k141_448228_14 | 17394 | 18830 | - | GT5 |
| pfam | k141_448228 | k141_448228_15 | 18835 | 19980 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_448228 | k141_448228_16 | 19970 | 21112 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_448228 | k141_448228_17 | 21174 | 23123 | - | CBM48 | GH13_9 |
Gene ID: k141_448228_4
Type: CAZyme
Location: 4160 - 5176 (-)
Type: CAZyme
Location: 4160 - 5176 (-)
Gene ID: k141_448228_5
Type: CAZyme
Location: 5203 - 6387 (-)
Type: CAZyme
Location: 5203 - 6387 (-)
Gene ID: k141_448228_6
Type: TC
Location: 6573 - 8291 (-)
Type: TC
Location: 6573 - 8291 (-)
Gene ID: k141_448228_7
Type: STP
Location: 8291 - 8560 (-)
Type: STP
Location: 8291 - 8560 (-)
Gene ID: k141_448228_8
Type:
Location: 8758 - 8946 (-)
Type:
Location: 8758 - 8946 (-)
Gene ID: k141_448228_9
Type: TC
Location: 9145 - 11334 (+)
Type: TC
Location: 9145 - 11334 (+)
Gene ID: k141_448228_10
Type: pfam
Location: 11493 - 11777 (+)
Type: pfam
Location: 11493 - 11777 (+)
Gene ID: k141_448228_11
Type: pfam
Location: 11958 - 13004 (+)
Type: pfam
Location: 11958 - 13004 (+)
Gene ID: k141_448228_12
Type: CAZyme
Location: 13031 - 14869 (-)
Type: CAZyme
Location: 13031 - 14869 (-)
Gene ID: k141_448228_13
Type: CAZyme
Location: 14850 - 17288 (-)
Type: CAZyme
Location: 14850 - 17288 (-)
Gene ID: k141_448228_14
Type: CAZyme
Location: 17394 - 18830 (-)
Type: CAZyme
Location: 17394 - 18830 (-)
Gene ID: k141_448228_15
Type: pfam
Location: 18835 - 19980 (-)
Type: pfam
Location: 18835 - 19980 (-)
Gene ID: k141_448228_16
Type: pfam
Location: 19970 - 21112 (-)
Type: pfam
Location: 19970 - 21112 (-)
Gene ID: k141_448228_17
Type: CAZyme
Location: 21174 - 23123 (-)
Type: CAZyme
Location: 21174 - 23123 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus agilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.