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Cluster: GH211_15_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59789 k141_59789_3 2203 3066 + 8.A.5.1.4
TF k141_59789 k141_59789_4 3068 3523 + MerR
TC k141_59789 k141_59789_5 3528 4484 + 8.A.5.1.7
TC k141_59789 k141_59789_6 4957 6426 + 2.A.17.1.6
pfam k141_59789 k141_59789_7 6808 7602 + ApbA | NAD_binding_2 | F420_oxidored | P5CR_dimer
CAZyme k141_59789 k141_59789_8 7667 8800 + CE9
TF k141_59789 k141_59789_9 8822 9523 + GntR
CAZyme k141_59789 k141_59789_10 9564 10295 - GT26
pfam k141_59789 k141_59789_11 10408 11235 + NAD_synthase
TC k141_59789 k141_59789_12 11294 13066 - 2.A.16.2.2
Gene ID: k141_59789_3
Type: TC
Location: 2203 - 3066 (+)
Gene ID: k141_59789_4
Type: TF
Location: 3068 - 3523 (+)
Gene ID: k141_59789_5
Type: TC
Location: 3528 - 4484 (+)
Gene ID: k141_59789_6
Type: TC
Location: 4957 - 6426 (+)
Gene ID: k141_59789_7
Type: pfam
Location: 6808 - 7602 (+)
Gene ID: k141_59789_8
Type: CAZyme
Location: 7667 - 8800 (+)
Gene ID: k141_59789_9
Type: TF
Location: 8822 - 9523 (+)
Gene ID: k141_59789_10
Type: CAZyme
Location: 9564 - 10295 (-)
Gene ID: k141_59789_11
Type: pfam
Location: 10408 - 11235 (+)
Gene ID: k141_59789_12
Type: TC
Location: 11294 - 13066 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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