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Genome Details

Selected Rep_genome_ID: DM001_35
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900552675
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
DianaHT_2018_SRR6795025_bin.11 2,741,324 93.96% 1.833% Bangladesh Asia ELGG
DM001_35 3,066,733 99.09% 0.37% NA Africa H3AfricaPhase2
GCA_021627065.1_ASM2162706v1_genomic 2,726,725 95.1% 0.76% NA Africa H3AfricaPhase1
HRGMv2_0246 2,865,617 98.14% 0.37% South Korea Asia HRGM
MGYG000000701 3,061,545 97.97% 0.74% Kazakhstan Asia UHGG
Rep_205 3,128,474 93.2751% 1.2037% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
DM001_35_CGC23 CGCFAM_00013 Yes 7 1
DM001_35_CGC28 CGCFAM_00034 Yes 9 4
DM001_35_CGC39 CGCFAM_00059 Yes 6 2
DM001_35_CGC3 CGCFAM_00068 Yes 5 2
DM001_35_CGC18 CGCFAM_00072 Yes 3 2
DM001_35_CGC44 CGCFAM_00109 Yes 14 7 host glycan
DM001_35_CGC6 CGCFAM_00111 Yes 4 1 alpha-glucan
DM001_35_CGC29 CGCFAM_00120 Yes 4 1
DM001_35_CGC41 CGCFAM_00213 Yes 5 2 beta-glucan
DM001_35_CGC7 CGCFAM_00265 Yes 5 2 beta-glucan
DM001_35_CGC16 CGCFAM_00313 Yes 4 1
DM001_35_CGC45 CGCFAM_00395 Yes 23 1
DM001_35_CGC26 CGCFAM_00476 Yes 6 1
DM001_35_CGC40 CGCFAM_00629 Yes 5 2
DM001_35_CGC17 CGCFAM_00648 Yes 4 1
DM001_35_CGC42 CGCFAM_00837 Yes 5 2
DM001_35_CGC19 CGCFAM_00862 Yes 9 2
DM001_35_CGC4 CGCFAM_00881 Yes 3 1
DM001_35_CGC14 CGCFAM_02091 Yes 4 2
DM001_35_CGC31 CGCFAM_02387 Yes 3 1
DM001_35_CGC25 CGCFAM_02476 Yes 3 1
DM001_35_CGC27 CGCFAM_04562 Yes 4 1
DM001_35_CGC30 CGCFAM_06470 Yes 8 3
DM001_35_CGC21 CGCFAM_07526 Yes 8 2
DM001_35_CGC11 CGCFAM_08793 Yes 6 1
Top CAZyme Families