Genome Details
Selected Rep_genome_ID: DM001_35
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900552675
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| DianaHT_2018_SRR6795025_bin.11 | 2,741,324 | 93.96% | 1.833% | Bangladesh | Asia | ELGG |
| DM001_35 | 3,066,733 | 99.09% | 0.37% | NA | Africa | H3AfricaPhase2 |
| GCA_021627065.1_ASM2162706v1_genomic | 2,726,725 | 95.1% | 0.76% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0246 | 2,865,617 | 98.14% | 0.37% | South Korea | Asia | HRGM |
| MGYG000000701 | 3,061,545 | 97.97% | 0.74% | Kazakhstan | Asia | UHGG |
| Rep_205 | 3,128,474 | 93.2751% | 1.2037% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| DM001_35_CGC1 | CGCFAM_09270 | Yes | 5 | 2 | |
| DM001_35_CGC10 | CGCFAM_09271 | Yes | 11 | 3 | |
| DM001_35_CGC15 | CGCFAM_09272 | Yes | 3 | 1 | |
| DM001_35_CGC32 | CGCFAM_09273 | Yes | 6 | 1 | |
| DM001_35_CGC34 | CGCFAM_09274 | Yes | 8 | 1 | |
| DM001_35_CGC47 | CGCFAM_09275 | Yes | 7 | 1 | |
| DM001_35_CGC5 | CGCFAM_09276 | Yes | 3 | 1 |
Top CAZyme Families