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Cluster: DM001_35_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180811 k141_180811_8 10963 14046 + 1.B.14.6.1
pfam k141_180811 k141_180811_9 14130 15710 + SusD_RagB | SusD-like_3
CAZyme k141_180811 k141_180811_10 15897 18329 + GH3
pfam k141_180811 k141_180811_11 18631 19119 + Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
TC k141_180811 k141_180811_12 19325 20794 + 2.A.47.1.12
TC k141_180811 k141_180811_13 20929 22149 - 2.A.6.1.7
TC k141_180811 k141_180811_14 22196 25306 - 2.A.6.1.7
TC k141_180811 k141_180811_15 25366 26508 - 2.A.6.2.20
NULL(UNKNOWN) k141_180811 k141_180811_16 26643 27095 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_180811 k141_180811_17 27265 28422 - CE9
CAZyme k141_180811 k141_180811_18 28533 29690 - CE9
Gene ID: k141_180811_8
Type: TC
Location: 10963 - 14046 (+)
Gene ID: k141_180811_9
Type: pfam
Location: 14130 - 15710 (+)
Gene ID: k141_180811_10
Type: CAZyme
Location: 15897 - 18329 (+)
Gene ID: k141_180811_11
Type: pfam
Location: 18631 - 19119 (+)
Gene ID: k141_180811_12
Type: TC
Location: 19325 - 20794 (+)
Gene ID: k141_180811_13
Type: TC
Location: 20929 - 22149 (-)
Gene ID: k141_180811_14
Type: TC
Location: 22196 - 25306 (-)
Gene ID: k141_180811_15
Type: TC
Location: 25366 - 26508 (-)
Gene ID: k141_180811_16
Type:
Location: 26643 - 27095 (-)
Gene ID: k141_180811_17
Type: CAZyme
Location: 27265 - 28422 (-)
Gene ID: k141_180811_18
Type: CAZyme
Location: 28533 - 29690 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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