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Cluster: DM001_35_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_168708 k141_168708_15 21870 24143 - GH3
CAZyme k141_168708 k141_168708_16 24160 26667 - GH2
CAZyme k141_168708 k141_168708_17 26880 28865 - CBM72 | GH16
pfam k141_168708 k141_168708_18 29061 31058 - SusF_SusE | SusF_SusE
pfam k141_168708 k141_168708_19 31107 32795 - SusD_RagB | SusD-like_3
TC k141_168708 k141_168708_20 32824 35634 - 1.B.14.6.1
pfam k141_168708 k141_168708_21 35669 37429 - SusD_RagB | SusD-like_3
TC k141_168708 k141_168708_22 37441 40866 - 1.B.14.6.1
Gene ID: k141_168708_15
Type: CAZyme
Location: 21870 - 24143 (-)
Gene ID: k141_168708_16
Type: CAZyme
Location: 24160 - 26667 (-)
Gene ID: k141_168708_17
Type: CAZyme
Location: 26880 - 28865 (-)
Gene ID: k141_168708_18
Type: pfam
Location: 29061 - 31058 (-)
Gene ID: k141_168708_19
Type: pfam
Location: 31107 - 32795 (-)
Gene ID: k141_168708_20
Type: TC
Location: 32824 - 35634 (-)
Gene ID: k141_168708_21
Type: pfam
Location: 35669 - 37429 (-)
Gene ID: k141_168708_22
Type: TC
Location: 37441 - 40866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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