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Cluster: DM001_35_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_174214 k141_174214_30 28719 29762 - 9.B.183.1.5
NULL(UNKNOWN) k141_174214 k141_174214_31 29786 30901 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_174214 k141_174214_32 30920 33538 - 1.B.18.1.2
TC k141_174214 k141_174214_33 33604 34236 - 9.B.18.1.3
pfam k141_174214 k141_174214_34 34320 35111 - ThiF
CAZyme k141_174214 k141_174214_35 35274 36107 + GT2
TF k141_174214 k141_174214_36 36162 40133 - HTH_AraC
CAZyme k141_174214 k141_174214_37 40152 42284 - GH92
Gene ID: k141_174214_30
Type: TC
Location: 28719 - 29762 (-)
Gene ID: k141_174214_31
Type:
Location: 29786 - 30901 (-)
Gene ID: k141_174214_32
Type: TC
Location: 30920 - 33538 (-)
Gene ID: k141_174214_33
Type: TC
Location: 33604 - 34236 (-)
Gene ID: k141_174214_34
Type: pfam
Location: 34320 - 35111 (-)
Gene ID: k141_174214_35
Type: CAZyme
Location: 35274 - 36107 (+)
Gene ID: k141_174214_36
Type: TF
Location: 36162 - 40133 (-)
Gene ID: k141_174214_37
Type: CAZyme
Location: 40152 - 42284 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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