Genome Details
Selected Rep_genome_ID: CGMR100343
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_E
Species
Bacteroides_E sp030152865
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR100343 | 2,126,756 | 92.76% | 1.47% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR100343_CGC13 | CGCFAM_00001 | Yes | 5 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR100343_CGC20 | CGCFAM_00003 | Yes | 7 | 2 | |
| CGMR100343_CGC4 | CGCFAM_00025 | Yes | 7 | 2 | pectin/alpha-glucan |
| CGMR100343_CGC21 | CGCFAM_00059 | Yes | 8 | 2 | |
| CGMR100343_CGC17 | CGCFAM_00072 | Yes | 4 | 2 | |
| CGMR100343_CGC11 | CGCFAM_00095 | Yes | 12 | 4 | |
| CGMR100343_CGC1 | CGCFAM_00138 | Yes | 9 | 3 | |
| CGMR100343_CGC6 | CGCFAM_00219 | Yes | 4 | 3 | host glycan |
| CGMR100343_CGC14 | CGCFAM_00868 | Yes | 6 | 2 | |
| CGMR100343_CGC26 | CGCFAM_02217 | Yes | 3 | 2 | |
| CGMR100343_CGC29 | CGCFAM_09230 | Yes | 4 | 1 |
Top CAZyme Families