Cluster: CGMR100343_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR100343
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_378446 | k141_378446_8 | 6185 | 8647 | - | 3.A.3.5.19 |
| TF | k141_378446 | k141_378446_9 | 8735 | 9298 | - | HTH_AraC |
| TC | k141_378446 | k141_378446_10 | 9448 | 10347 | - | 1.A.23.2.1 |
| CAZyme | k141_378446 | k141_378446_11 | 10615 | 11355 | + | GT2 |
| TC | k141_378446 | k141_378446_12 | 11368 | 12045 | + | 2.A.123.4.1 |
| pfam | k141_378446 | k141_378446_13 | 12042 | 13055 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | k141_378446 | k141_378446_14 | 13042 | 14664 | + | GT83 |
Gene ID: k141_378446_8
Type: TC
Location: 6185 - 8647 (-)
Type: TC
Location: 6185 - 8647 (-)
Gene ID: k141_378446_9
Type: TF
Location: 8735 - 9298 (-)
Type: TF
Location: 8735 - 9298 (-)
Gene ID: k141_378446_10
Type: TC
Location: 9448 - 10347 (-)
Type: TC
Location: 9448 - 10347 (-)
Gene ID: k141_378446_11
Type: CAZyme
Location: 10615 - 11355 (+)
Type: CAZyme
Location: 10615 - 11355 (+)
Gene ID: k141_378446_12
Type: TC
Location: 11368 - 12045 (+)
Type: TC
Location: 11368 - 12045 (+)
Gene ID: k141_378446_13
Type: pfam
Location: 12042 - 13055 (+)
Type: pfam
Location: 12042 - 13055 (+)
Gene ID: k141_378446_14
Type: CAZyme
Location: 13042 - 14664 (+)
Type: CAZyme
Location: 13042 - 14664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_E
Species
Bacteroides_E sp030152865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.