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Cluster: CGMR100343_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31242 k141_31242_2 1076 2287 - GH88
pfam k141_31242 k141_31242_3 2304 3314 - DUF5017
TC k141_31242 k141_31242_4 3341 5080 - 8.A.46.1.3
TC k141_31242 k141_31242_5 5100 8291 - 1.B.14.6.1
NULL(UNKNOWN) k141_31242 k141_31242_6 8321 9001 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_31242 k141_31242_7 9029 10954 - PL33_1
TF k141_31242 k141_31242_8 11273 15310 + HTH_AraC
sulfatase k141_31242 k141_31242_9 15482 17041 + S1_27
CAZyme k141_31242 k141_31242_10 17065 20151 + PL8_2
CAZyme k141_31242 k141_31242_11 20235 23267 + PL8_2
NULL(UNKNOWN) k141_31242 k141_31242_12 23615 24304 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_31242 k141_31242_13 24364 25014 + 3.D.10.1.2
Gene ID: k141_31242_2
Type: CAZyme
Location: 1076 - 2287 (-)
Gene ID: k141_31242_3
Type: pfam
Location: 2304 - 3314 (-)
Gene ID: k141_31242_4
Type: TC
Location: 3341 - 5080 (-)
Gene ID: k141_31242_5
Type: TC
Location: 5100 - 8291 (-)
Gene ID: k141_31242_6
Type:
Location: 8321 - 9001 (-)
Gene ID: k141_31242_7
Type: CAZyme
Location: 9029 - 10954 (-)
Gene ID: k141_31242_8
Type: TF
Location: 11273 - 15310 (+)
Gene ID: k141_31242_9
Type: sulfatase
Location: 15482 - 17041 (+)
Gene ID: k141_31242_10
Type: CAZyme
Location: 17065 - 20151 (+)
Gene ID: k141_31242_11
Type: CAZyme
Location: 20235 - 23267 (+)
Gene ID: k141_31242_12
Type:
Location: 23615 - 24304 (+)
Gene ID: k141_31242_13
Type: TC
Location: 24364 - 25014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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