Genome Details
Selected Rep_genome_ID: CGMR091553
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella stercoripullorum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR091553 | 2,322,401 | 100% | 0% | China | Asia | CGMR |
| HRGMv2_1648 | 2,281,389 | 98.38% | 0.806% | Sardinia, Italy | Europe | HRGM |
| MGYG000004664 | 2,347,724 | 100% | 0% | China | Asia | UHGG |
| ShaoY_2019_ERR3405984_bin.17 | 2,334,320 | 100% | 0% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR091553_CGC11 | CGCFAM_00007 | Yes | 4 | 2 | |
| CGMR091553_CGC7 | CGCFAM_00094 | Yes | 5 | 1 | beta-mannan/fructan |
| CGMR091553_CGC2 | CGCFAM_00199 | Yes | 8 | 1 | |
| CGMR091553_CGC16 | CGCFAM_00230 | Yes | 4 | 1 | |
| CGMR091553_CGC8 | CGCFAM_00309 | Yes | 7 | 2 | |
| CGMR091553_CGC18 | CGCFAM_00427 | Yes | 4 | 2 | |
| CGMR091553_CGC5 | CGCFAM_01910 | Yes | 7 | 1 | |
| CGMR091553_CGC19 | CGCFAM_03827 | Yes | 9 | 1 | |
| CGMR091553_CGC9 | CGCFAM_07113 | Yes | 4 | 1 | |
| CGMR091553_CGC12 | CGCFAM_09122 | Yes | 8 | 1 |
Top CAZyme Families