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Cluster: CGMR091553_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31730 k141_31730_7 8366 10561 - GH36
TC k141_31730 k141_31730_8 10741 11586 - 3.A.1.1.28
TC k141_31730 k141_31730_9 11586 12449 - 3.A.1.1.28
TC k141_31730 k141_31730_10 12462 13748 - 3.A.1.1.28
TC k141_31730 k141_31730_11 13767 14882 - 3.A.1.1.26
TF k141_31730 k141_31730_12 15290 16144 + HTH_AraC | HTH_AraC
pfam k141_31730 k141_31730_13 16435 17370 + DHH | DHHA2
TC k141_31730 k141_31730_14 17665 19083 + 2.A.33.1.1
Gene ID: k141_31730_7
Type: CAZyme
Location: 8366 - 10561 (-)
Gene ID: k141_31730_8
Type: TC
Location: 10741 - 11586 (-)
Gene ID: k141_31730_9
Type: TC
Location: 11586 - 12449 (-)
Gene ID: k141_31730_10
Type: TC
Location: 12462 - 13748 (-)
Gene ID: k141_31730_11
Type: TC
Location: 13767 - 14882 (-)
Gene ID: k141_31730_12
Type: TF
Location: 15290 - 16144 (+)
Gene ID: k141_31730_13
Type: pfam
Location: 16435 - 17370 (+)
Gene ID: k141_31730_14
Type: TC
Location: 17665 - 19083 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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